four hours later mice were sacrificed and lung tissue and bronchioalveolar lavage fluid was collected. Bacterial burden was assessed by counting CFUs in 26225771 serial dilutions of lung homogenates and BALF. CQ Scopoletin custom synthesis treatment significantly increased bacterial load following P. aeruginosa infection in both the lungs and the BALF. Animal survival was also assessed for 10 days post infection with 16109 CFU P. aeruginosa strain 8821. While no mortality was observed in animals treated with PBS control, 40% mortality was observed in the chloroquine treated mice . Thus, treatment with CQ reduced the clearance of P. aeruginosa from the lung and impaired animal survival. Given that neutrophil recruitment to the site of infection contributes to the clearance of P. aeruginosa, we assessed neutrophil accumulation in the lungs and BALF of CQ and saline treated mice through assaying the activity of the neutrophil specific enzyme myeloperoxidase. MPO activity was unaffected by CQ treatment both in the lungs and the BALF. The autophagy pathway has also been proposed to play a role in regulating inflammatory cytokine production. In order to determine whether the differences in bacterial clearance observed in chloroquine treated mice were associated with dysregulation of cytokine responses, the 10646850 levels of various inflammatory cytokines were assessed in the lungs and BALF of P. aeruginosa and saline treated mice pretreated with PBS or chloroquine. No significant differences were observed in the levels of any of the cytokines assayed suggesting that manipulation of the autophagy pathway did not impact host inflammatory responses. Together these data suggest that the defect in bacterial clearance in CQ treated mice is associated not with coordination of the immune response, but instead with impaired bacterial killing. Having demonstrated that pharmacological disruption of the autophagy pathway impairs host defense against P. aeruginosa, we next set out to test the therapeutic potential of pharmacological induction of the pathway. One of the best studied pharmacological inducers of autophagy is rapamycin, which promotes autophagy through inhibition of the mammalian target of rapamycin, a master regulator of the autophagy pathway. Similar to chloroquine treatment, rapamycin treatment did not impact mast cell numbers or viability during P. aeruginosa infection in vitro. Mice were pretreated with rapamycin at a dose of 10 mg/kg, or an equivalent volume of diluent both at the time of infection, and one day prior. Mice were infected intranasally with 16109 CFU/mouse with P. aeruginosa. Twenty four hours later mice were sacrificed and lung tissue and BALF were collected. 
Bacterial burden was assessed by counting CFUs in serial dilutions of lung homogenates and BALF. We found that rapamycin significantly reduced the bacterial load in both the lungs and the BALF of rapamycin treated mice compared to diluent treated control mice. To examine whether pharmacological modulation of autophagy affects animal survival, mice were pretreated with rapamycin or diluent and intranasally infected with P. aeruginosa strain 8821. Animal survival was observed for 7 days. P. aeruginosa did not cause mortality in mice treated rapamycin or diluent. We next assessed cytokine production and neutrophil infiltration in the lungs and BALF of rapamycin and diluent treated mice. Consistent with the reported anti-inflammatory roles of rapamycin, treatment of mice with rapamycin showed significantly reduced
